To avoid problems with installation, use of the virtualenv Python virtual environment is recommended.
Then use pip to install all dependencies (numpy, scipy, matplotlib, netCDF4, cython, pyproj, Shapely, ...), e.g.:
- ** pip install cython numpy matplotlib scipy netCDF4 shapely pyproj**
Then run the following to install the eddy tracker:
- ** python setup.py install**
Two executables are now available in your PATH: EddyIdentification and EddyTracking
Edit the corresponding yaml files and then run the code, e.g.:
- ** EddyIdentification eddy_identification.yaml**
for identification, followed by:
- ** EddyTracking tracking.yaml**
for tracking.