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installation.rst

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How do I get set up ?

You could install stable version with pip

pip install pyEddyTracker

Or with source which are available on github https://github.com/AntSimi/py-eddy-tracker

Use python3. To avoid problems with installation, use of the virtualenv Python virtual environment is recommended or conda.

Then use pip to install all dependencies (numpy, scipy, matplotlib, netCDF4, ...), e.g.:

pip install numpy scipy netCDF4 matplotlib opencv-python pyyaml pint polygon3

Then run the following to install the eddy tracker:

python setup.py install

Several executables are available in your PATH:

GridFiltering # Allow to apply a high frequency filter on a NetCDF grid
EddyId # Provide identification of eddies for one grid
EddySubSetter # Allow to apply sub setting on eddies dataset
EddyTracking # Allow to track Identification dataset